You are here

HomeTools


INTEGRATING PHENOTYPE, GENOTYPE, AND
ENVIRONMENTAL DATA FOR GEOREFERENCED PLANTS
Long-lived and sessile plant species serve as ideal models to assess population structure and adaptation to the environment. Despite the availability of comprehensive data, the researchers who study them are challenged to integrate data describing genotype, phenotype, and the environment. Towards this goal, the web application CartograTree (now known as CartograPlant), was designed and implemented as an open repository and open-source analytic web-based framework for all three.
Submit Data Submit data for analysis
User Guide Detailed documentation,
tutorials and resources

25,602,931

plants

790

species

321

genera

1,114,284,506

genotypes

1,919,257

phenotypes

988

map layers
404 studies
from
 43 countries

Current Curation Team

Meghan Myles45,649 plants
Rachel Wolther43,358 plants
Isabella Harding27,490 plants
Jeffrey Gamer18,487 plants
Madison Gadomski13,636 plants

Curation Alumni

Charles Demurjian66,367 plants
Emily Strickland32,676 plants
Victoria Burton26,151 plants
Isaac McEvoy6,676 plants
Barnaly Pande5,030 plants

External Submissions

x, , et al.666 plants
x, , et al.666 plants
Jie, Liu,, et al.2,384 plants
James, Cohen,, et al.171 plants
Risharde, Ramnath,, et al.24 plants

How to reference CartograTree

Wegrzyn, J. L., Falk, T., Grau, E., Buehler, S., Ramnath, R., & Herndon, N. (2019) Cyberinfrastructure and resources to enable an integrative approach to studying forest trees. Evolutionary Applications.

Wegrzyn J.L., Staton M.A., Street N. R., Main D., Grau E., Herndon N., Buehler S., Falk T., Zaman S., Ramnath R., Richter P., Sun L., Condon B., Almsaeed A., Chen M.,Mannapperuma C., Jung S., Ficklin S. Cyberinfrastructure to Improve Forest Health and Productivity: The Role of Tree Databases in Connecting Genomes, Phenomes, and the Environment, TreeGenes. Database, Volume 2019. doi:10.3389/fpls.2019.00813

Falk T., Herndon N., Grau E., Buehler S., Richter P., Zaman S., Baker E.M., Ramnath R., Ficklin S., Staton M., Feltus F.A., Jung S., Main D., Wegrzyn J.L. (2018). Growing and cultivating the forest genomics database, TreeGenes. Database, Volume 2018 doi:10.1093/database/bay084